Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia sp. HH130630-07 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence.
Gene Summary
Adenine Count
53625 bp
Thymine Count
51275 bp
Guanine Count
135824 bp
Cytosine Count
134994 bp
Genome Length
375718 bp
Protein-coding Genes
298 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chad domain-containing protein | AFB00_RS19380 | Not Available | Positive | 4080660 - 4082324 | 58913.1 |
| php domain-containing protein | AFB00_RS19385 | Not Available | Positive | 4082321 - 4083382 | 37821.8 |
| glycoside hydrolase family 16 protein | AFB00_RS19390 | Not Available | Positive | 4083845 - 4084876 | 35424.4 |
| carbohydrate kinase | AFB00_RS19395 | Not Available | Negative | 4084895 - 4085884 | 33988.1 |
| gtp-binding protein | AFB00_RS19400 | Not Available | Positive | 4085993 - 4087003 | 36089.7 |
| hypothetical protein | AFB00_RS19405 | Not Available | Negative | 4087031 - 4087531 | 17603.1 |
| small ribosomal subunit rsm22 family protein | AFB00_RS19410 | Not Available | Negative | 4087739 - 4088800 | 36734.6 |
| isopentenyl-diphosphate delta-isomerase | AFB00_RS19415 | Not Available | Negative | 4088888 - 4089415 | 19061.4 |
| dha2 family efflux mfs transporter permease subunit | AFB00_RS19420 | Not Available | Positive | 4089590 - 4091050 | 49632.6 |
| mfs transporter | AFB00_RS19425 | Not Available | Negative | 4091061 - 4092392 | 45837.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
