Pseudonocardia sp. HH130630-07

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Pseudonocardia

Description

Pseudonocardia sp. HH130630-07 is a rod-shaped bacterium notable for possessing three replicons, indicating a complex genomic structure that may contribute to its adaptability and metabolic diversity. The presence of multiple replicons can often enhance the organism's ability to regulate gene expression and respond to environmental changes effectively. The genomic data for Pseudonocardia sp. HH130630-07 is archived under the accessions NZ_CP013854.1, NZ_CP013855.1, and NZ_CP013856.1. These accessions suggest that the organism has been sequenced, providing insights into its genetic makeup and potential functionalities. Understanding the characteristics and genomic architecture of Pseudonocardia sp. HH130630-07 is essential for exploring its ecological roles. Members of the Pseudonocardia genus are typically found in soil and are known for their interactions with other microorganisms, including their potential for antibiotic production. This highlights a significant ecological insight: the adaptability and metabolic versatility afforded by multiple replicons may allow Pseudonocardia sp. HH130630-07 to thrive in diverse environments and engage in complex interactions within microbial communities. Such interactions can impact nutrient cycling and the stability of ecosystems where these bacteria reside.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusPseudonocardia
SpeciesPseudonocardia sp. HH130630-07
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence.

Gene Summary

Adenine Count

53625 bp

Thymine Count

51275 bp

Guanine Count

135824 bp

Cytosine Count

134994 bp

Genome Length

375718 bp

Protein-coding Genes

298 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAFB00_RS14745Not AvailableNegative3048366 - 304875514809.5
gnat family n-acetyltransferaseAFB00_RS34040Not AvailableNegative3048834 - 304979335299.9
2'-5' rna ligase family proteinAFB00_RS14755Not AvailableNegative3049907 - 305042518176.6
voc family proteinAFB00_RS14760Not AvailableNegative3050455 - 305081112587.8
srpbcc family proteinAFB00_RS14765Not AvailableNegative3050821 - 305129417191.2
helix-turn-helix transcriptional regulatorAFB00_RS14770Not AvailableNegative3051291 - 305162012385.7
hypothetical proteinAFB00_RS14775Not AvailablePositive3052296 - 305265811868.8
coce/nond family hydrolaseAFB00_RS14780Not AvailableNegative3052728 - 305345626361.2
coce/nond family hydrolaseAFB00_RS14785Not AvailableNegative3053607 - 305453033498.0
hypothetical proteinAFB00_RS14790Not AvailableNegative3054883 - 30551409181.01

Displaying genes 3281 – 3290 of 6323 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.