Pseudonocardia sp. HH130630-07

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Pseudonocardia

Description

Pseudonocardia sp. HH130630-07 is a rod-shaped bacterium notable for possessing three replicons, indicating a complex genomic structure that may contribute to its adaptability and metabolic diversity. The presence of multiple replicons can often enhance the organism's ability to regulate gene expression and respond to environmental changes effectively. The genomic data for Pseudonocardia sp. HH130630-07 is archived under the accessions NZ_CP013854.1, NZ_CP013855.1, and NZ_CP013856.1. These accessions suggest that the organism has been sequenced, providing insights into its genetic makeup and potential functionalities. Understanding the characteristics and genomic architecture of Pseudonocardia sp. HH130630-07 is essential for exploring its ecological roles. Members of the Pseudonocardia genus are typically found in soil and are known for their interactions with other microorganisms, including their potential for antibiotic production. This highlights a significant ecological insight: the adaptability and metabolic versatility afforded by multiple replicons may allow Pseudonocardia sp. HH130630-07 to thrive in diverse environments and engage in complex interactions within microbial communities. Such interactions can impact nutrient cycling and the stability of ecosystems where these bacteria reside.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusPseudonocardia
SpeciesPseudonocardia sp. HH130630-07
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence.

Gene Summary

Adenine Count

53625 bp

Thymine Count

51275 bp

Guanine Count

135824 bp

Cytosine Count

134994 bp

Genome Length

375718 bp

Protein-coding Genes

298 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phb depolymerase family esteraseAFB00_RS07385Not AvailableNegative1544260 - 154532436076.9
hypothetical proteinAFB00_RS33030Not AvailablePositive1545540 - 15456864810.92
dihydrofolate reductase family proteinAFB00_RS07390Not AvailableNegative1545792 - 154638220827.6
cpbp family intramembrane glutamic endopeptidaseAFB00_RS07395Not AvailableNegative1546482 - 154730328989.0
tetr/acrr family transcriptional regulatorAFB00_RS07400Not AvailableNegative1547444 - 154803121148.4
prolyl oligopeptidase family serine peptidaseAFB00_RS07405Not AvailableNegative1548120 - 155018674276.9
nadp-dependent oxidoreductaseAFB00_RS07410Not AvailableNegative1550359 - 155131232720.1
tetr/acrr family transcriptional regulatorAFB00_RS07415Not AvailablePositive1551395 - 155196420502.4
helix-turn-helix domain-containing proteinAFB00_RS07420Not AvailablePositive1551992 - 155295734097.8
sgcj/ecac family oxidoreductaseAFB00_RS07425Not AvailablePositive1552962 - 155339615871.1

Displaying genes 1791 – 1800 of 6323 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.