Haloplanus rubicundus

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Haloplanus

Description

Haloplanus rubicundus is characterized by having two replicons, which are essential for its genetic stability and replication processes. This organism is cataloged under two specific accessions: NZ_CP031147.1 and NZ_CP031151.1. These accessions relate to the organism's genomic information, providing a basis for further research and understanding of its genetic makeup. The presence of two replicons in Haloplanus rubicundus suggests a level of genetic complexity that may contribute to its adaptability in various environments. This trait can play a crucial role in the organism’s ability to thrive in specific ecological niches, particularly in extreme conditions where other microorganisms might struggle. Understanding the genetic framework of Haloplanus rubicundus through its accessions can lead to insights into its metabolic pathways and ecological interactions. The dual replicon system may also indicate mechanisms for horizontal gene transfer, which can enhance its adaptability and resilience in fluctuating environments. In conclusion, the distinct trait of having two replicons, along with the associated accessions, highlights the genetic features of Haloplanus rubicundus that may influence its ecological roles and adaptive strategies in its habitat.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHaloplanus
SpeciesHaloplanus rubicundus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Haloplanus rubicundus strain CBA1112 plasmid pCBA1112-01, complete

Gene Summary

Adenine Count

48500 bp

Thymine Count

47931 bp

Guanine Count

64070 bp

Cytosine Count

64690 bp

Genome Length

225191 bp

Protein-coding Genes

182 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
universal stress proteinDU484_RS00290Not AvailableNegative72850 - 7329615568.0
replication factor aDU484_RS00295Not AvailableNegative73404 - 7415426880.7
yihy/virulence factor brkb family proteinDU484_RS00300Not AvailableNegative74311 - 7513529595.8
replication factor aDU484_RS20185Not AvailablePositive75227 - 753434686.0
upf0175 family proteinDU484_RS00310Not AvailableNegative75399 - 7576713638.4
replication factor aDU484_RS00315Not AvailableNegative75921 - 7627113091.1
marr family transcriptional regulatorDU484_RS00320Not AvailableNegative76271 - 7663913821.6
hypothetical proteinDU484_RS20190Not AvailablePositive76877 - 7736818113.8
hypothetical proteinDU484_RS19255Not AvailableNegative77426 - 7783314845.6
para family proteinDU484_RS00335Not AvailableNegative77830 - 7866931551.0

Displaying genes 61 – 70 of 273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.