Haloplanus rubicundus strain CBA1112

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Haloplanus

Description

Haloplanus rubicundus strain CBA1112 is characterized by its possession of two replicons, which indicates a complex genetic architecture that may contribute to its adaptability and survival in various environments. The strain is cataloged under the GenBank accessions NZ_CP031148.1 and NZ_CP031149.1, providing a valuable resource for further genomic studies and comparative analyses within the Haloplanus genus. This organism's dual-replicon structure may suggest an evolutionary advantage, potentially allowing for enhanced gene regulation and metabolic diversity. Such traits could be particularly beneficial in fluctuating ecological niches, where adaptability is crucial for survival. By studying Haloplanus rubicundus strain CBA1112, researchers can gain insights into the mechanisms of genomic flexibility and resilience in microbial populations. This strain may serve as a model to explore how similar microorganisms utilize their genetic resources to thrive in extreme environments, enhancing our understanding of microbial ecology and evolutionary biology.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHaloplanus
SpeciesHaloplanus rubicundus
Strainstrain CBA1112

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Haloplanus rubicundus strain CBA1112 chromosome, complete genome.

Gene Summary

Adenine Count

562117 bp

Thymine Count

560553 bp

Guanine Count

1139929 bp

Cytosine Count

1138788 bp

Genome Length

3401387 bp

Protein-coding Genes

3564 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive108734 - 108747Not Available
Gp243DU484_RS01495Not AvailablePositive119167 - 12072953414.2
gtra family proteinDU484_RS01500Not AvailableNegative120731 - 12115315632.3
sulfatase-like hydrolase/transferaseDU484_RS01505Not AvailableNegative121162 - 12259251679.7
Trna,type:undet,anti_codon:???;Not AvailableNot AvailablePositive122749 - 122854Not Available
Hnh domain endonucleaseDU484_RS01515Not AvailablePositive123675 - 1239389847.45
UnkownDU484_RS01520Not AvailablePositive123938 - 12582170132.5
Gp2DU484_RS01525Not AvailablePositive125886 - 12622412103.5
Gp3DU484_RS01530Not AvailablePositive126230 - 12662814523.5
Vp4 precursorDU484_RS01535Not AvailablePositive126816 - 12811446306.5

Displaying genes 1 – 10 of 3772 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.