Haloplanus rubicundus

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Haloplanus

Description

Haloplanus rubicundus is characterized by having two replicons, which are essential for its genetic stability and replication processes. This organism is cataloged under two specific accessions: NZ_CP031147.1 and NZ_CP031151.1. These accessions relate to the organism's genomic information, providing a basis for further research and understanding of its genetic makeup. The presence of two replicons in Haloplanus rubicundus suggests a level of genetic complexity that may contribute to its adaptability in various environments. This trait can play a crucial role in the organism’s ability to thrive in specific ecological niches, particularly in extreme conditions where other microorganisms might struggle. Understanding the genetic framework of Haloplanus rubicundus through its accessions can lead to insights into its metabolic pathways and ecological interactions. The dual replicon system may also indicate mechanisms for horizontal gene transfer, which can enhance its adaptability and resilience in fluctuating environments. In conclusion, the distinct trait of having two replicons, along with the associated accessions, highlights the genetic features of Haloplanus rubicundus that may influence its ecological roles and adaptive strategies in its habitat.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHaloplanus
SpeciesHaloplanus rubicundus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Haloplanus rubicundus strain CBA1112 plasmid pCBA1112-01, complete

Gene Summary

Adenine Count

48500 bp

Thymine Count

47931 bp

Guanine Count

64070 bp

Cytosine Count

64690 bp

Genome Length

225191 bp

Protein-coding Genes

182 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDU484_RS00860Not AvailableNegative220771 - 22234557598.9
transcription initiation factor iibDU484_RS00865Not AvailablePositive222877 - 22385135059.1
tyrosine-type recombinase/integraseDU500_RS17020Not AvailableNegative622 - 175542475.2
helix-turn-helix transcriptional regulatorDU500_RS17025Not AvailablePositive2257 - 316233730.9
duf555 domain-containing proteinDU500_RS17030Not AvailablePositive3476 - 380511431.5
para family proteinDU500_RS17035Not AvailablePositive4097 - 506836335.9
hypothetical proteinDU500_RS17040Not AvailablePositive5071 - 562519703.9
hypothetical proteinDU500_RS17045Not AvailablePositive5719 - 612616008.5
tram domain-containing proteinDU500_RS17050Not AvailableNegative6150 - 657815510.8
dead/deah box helicaseDU500_RS17055Not AvailablePositive6722 - 813453491.3

Displaying genes 181 – 190 of 273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.