Rhodobacter capsulatus Y262

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Genus

Rhodobacter

Description

Rhodobacter capsulatus Y262 is a Gram-negative, rod-shaped bacterium that thrives in aquatic environments. As a chemoheterotroph, it obtains its energy from organic compounds, allowing it to play a role in nutrient cycling within its ecosystem. This organism is classified as a facultative anaerobe, indicating that it can grow in both the presence and absence of oxygen, which enhances its adaptability to varying environmental conditions. Rhodobacter capsulatus Y262 is motile, possessing flagella that facilitate movement in its aquatic habitat. It exhibits optimal growth at 30°C, falling within the mesophilic temperature range. The bacterium contains one replicon and is characterized as nonsporulating, suggesting that it does not form spores as a means of survival under adverse conditions. Being free-living, Rhodobacter capsulatus Y262 has the potential to interact with various microorganisms and contribute to the microbial community dynamics in aquatic systems. Its ability to utilize organic matter makes it an important player in the decomposition processes, thereby influencing the availability of nutrients for other organisms in its habitat. This ecological role underscores the significance of Rhodobacter capsulatus Y262 in maintaining the balance of aquatic ecosystems and highlights its potential utility in biotechnological applications focused on organic matter degradation.

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodobacter capsulatus Y262
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Rhodobacter capsulatus Y262 seq0054, whole genome shotgun

Gene Summary

Adenine Count

644836 bp

Thymine Count

641723 bp

Guanine Count

1276345 bp

Cytosine Count

1281926 bp

Genome Length

3850334 bp

Protein-coding Genes

3416 genes

Non-Coding Genes

254 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nudix hydrolaseU715_00470Not AvailableNegative99022 - 9946816718.4
aminoglycoside phosphotransferaseU715_00475Not AvailableNegative99465 - 10043634882.9
4-aminobutyrate aminotransferaseU715_00480Not AvailableNegative100436 - 10169845016.3
peptide chain release factor iU715_00485Not AvailableNegative101691 - 10211315774.1
2-methylthioadenine synthaseU715_00490Not AvailableNegative102205 - 10346445872.7
diaminopimelate epimeraseU715_00495Not AvailableNegative103461 - 10429429318.2
Trna-lysNot AvailableNot AvailablePositive104401 - 104476Not Available
methionine sulfoxide reductase bU715_00505Not AvailablePositive104569 - 10501516661.5
methionine sulfoxide reductase aU715_00510Not AvailablePositive105020 - 10551718673.1
flagellar biosynthesis protein flipU715_00515Not AvailableNegative105508 - 10623025826.7

Displaying genes 331 – 340 of 3670 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.