Rhodobacter capsulatus strain SP108

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Genus

Rhodobacter

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
Family
GenusRhodobacter
SpeciesRhodobacter capsulatus
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodobacter capsulatus strain SP108
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Rhodobacter capsulatus strain SP108

Accession NumberSWJZ00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3836 genes

Non-Coding Genes

162 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Putative tail fiber proteinFBT96_00510Not Available-98552 - 10022761302.3
Putative tail assembly proteinFBT96_00515Not Available-100224 - 10066416305.6
hypothetical proteinFBT96_00520Not Available+100751 - 10116715162.4
Hypothetical proteinFBT96_00525Not Available-101248 - 10177519293.7
Hypothetical proteinFBT96_00530Not Available-101772 - 10219415853.8
Tape measure proteinFBT96_00535Not Available-102191 - 105292107210.0
Trna-lys;Not AvailableNot Available+104422 - 104497Not Available
Hypothetical proteinFBT96_00540Not Available-105323 - 10567012554.9
Hypothetical proteinFBT96_00545Not Available-105667 - 10599912230.4
Hypothetical proteinFBT96_00550Not Available-106016 - 10695433778.5

Displaying genes 1 – 10 of 3998 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

54 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm0001939spheroideneC41H60OChemical structure of spheroideneNot available
Average568.93Da
Monoisotopic568.464416552Da
BASm0002002glyoxylateC2HO3Chemical structure of glyoxylateNot available
Average73.0275Da
Monoisotopic72.9925689Da
BASm0002307(2R,3R)-2,3-dihydroxy-3-methylpentanoateC6H11O4Chemical structure of (2R,3R)-2,3-dihydroxy-3-methylpentanoateNot available
Average147.1491Da
Monoisotopic147.06573384Da
BASm0002584(S)-malyl-CoAC25H35N7O20P3SChemical structure of (S)-malyl-CoANot available
Average878.57Da
Monoisotopic878.0897866Da
BASm0002833FMNH2C17H21N4O9PChemical structure of FMNH25666-16-0
Average456.3438Da
Monoisotopic456.1046148Da

Displaying 1–10 of 54 metabolites