Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia sp. SK013 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia sp. SK013
Accession NumberLAJH00000000.1
Gene Summary
Adenine Count
863690 bp
Thymine Count
868777 bp
Guanine Count
1170566 bp
Cytosine Count
1146775 bp
Genome Length
4049808 bp
Protein-coding Genes
3968 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | shim_40230 | Not Available | - | 4041974 - 4042234 | 9702.72 |
| chaperone protein clpb | shim_40240 | Q98G96 | + | 4042502 - 4045117 | 95279.9 |
| 6-phosphogluconate phosphatase | shim_40250 | Q94K71 | + | 4045347 - 4046021 | 23843.8 |
| glutamate synthase (nadph) large chain precursor | shim_40260 | O34849 | + | 4046083 - 4047579 | 54825.4 |
| sulfoxide reductase catalytic subunit yedy precursor | shim_40270 | Q5LNE0 | + | 4047696 - 4048598 | 33756.3 |
| hypothetical protein | shim_40280 | Not Available | + | 4048601 - 4048831 | 8162.68 |
| sulfoxide reductase heme-binding subunit yedz | shim_40290 | P58769 | + | 4048836 - 4049441 | 22614.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.