Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | N180_18720 | Not Available | Positive | 1146919 - 1147449 | 20390.6 |
| hypothetical protein | N180_18725 | Not Available | Positive | 1147484 - 1148263 | 30091.9 |
| cytochrome b5 | N180_18730 | Not Available | Positive | 1148268 - 1148504 | 9142.92 |
| sugar kinase | N180_18735 | Not Available | Negative | 1148550 - 1149467 | 33547.4 |
| Trna-asn | Not Available | Not Available | Positive | 1149613 - 1149686 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 1149815 - 1149891 | Not Available |
| membrane protein | N180_15845 | Not Available | Negative | 1149984 - 1150620 | 24625.2 |
| secondary thiamine-phosphate synthase | N180_15850 | Not Available | Positive | 1150704 - 1151126 | 15910.1 |
| hypothetical protein | N180_15855 | Not Available | Positive | 1151261 - 1152403 | 43429.7 |
| mechanosensitive ion channel protein | N180_15860 | Not Available | Positive | 1152441 - 1154813 | 90080.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

