Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | + | 918548 - 918559 | Not Available |
| Dna breaking-rejoining enzyme | SAMN03003324_00828 | Not Available | + | 918709 - 919929 | 47817.4 |
| hypothetical protein | SAMN03003324_00829 | Not Available | - | 919961 - 920755 | 29243.2 |
| hypothetical protein | SAMN03003324_00830 | Not Available | - | 920757 - 921062 | 11488.2 |
| Endolysin | SAMN03003324_00831 | Not Available | - | 921064 - 921690 | 23989.7 |
| hypothetical protein | SAMN03003324_00832 | Not Available | - | 921824 - 922108 | 10633.5 |
| Baseplate wedge initiator | SAMN03003324_00833 | Not Available | - | 922114 - 925641 | 128865.0 |
| hypothetical protein | SAMN03003324_00834 | Not Available | - | 925638 - 926765 | 41629.1 |
| hypothetical protein | SAMN03003324_00835 | Not Available | - | 926765 - 928438 | 59346.5 |
| hypothetical protein | SAMN03003324_00836 | Not Available | - | 928438 - 929571 | 41982.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.