Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma-24 | N180_12695 | Not Available | Positive | 1121798 - 1122295 | 19583.5 |
| hypothetical protein | N180_12700 | Not Available | Positive | 1122282 - 1122872 | 23163.7 |
| hypothetical protein | N180_12705 | Not Available | Negative | 1122924 - 1123553 | 23502.8 |
| beta-n-acetylhexosaminidase | N180_12710 | Not Available | Negative | 1123583 - 1125469 | 69279.4 |
| thioredoxin reductase | N180_12720 | Not Available | Negative | 1125652 - 1126605 | 34199.5 |
| hypothetical protein | N180_12730 | Not Available | Negative | 1126702 - 1127331 | 24104.6 |
| methylcrotonoyl-coa carboxylase | N180_12735 | Not Available | Negative | 1127365 - 1128993 | 59142.3 |
| hypothetical protein | N180_18650 | Not Available | Negative | 1129358 - 1130089 | 24996.8 |
| peptidase m1 | N180_18655 | Not Available | Negative | 1130162 - 1131817 | 63194.8 |
| x-pro dipeptidyl-peptidase | N180_18665 | Not Available | Negative | 1132005 - 1133891 | 71409.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

