Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mechanosensitive ion channel protein mscs | N180_12645 | Not Available | Negative | 1111936 - 1112865 | 34927.4 |
| ribonuclease r | N180_12650 | Not Available | Positive | 1112965 - 1115097 | 80847.4 |
| hypothetical protein | N180_12655 | Not Available | Positive | 1115102 - 1116259 | 43098.7 |
| isoprenyl synthetase | N180_12660 | Not Available | Positive | 1116306 - 1117277 | 35979.7 |
| hypothetical protein | N180_12665 | Not Available | Negative | 1117280 - 1118245 | 37184.1 |
| hypothetical protein | N180_12670 | Not Available | Positive | 1118436 - 1118789 | 13338.2 |
| 50s ribosomal protein l27 | N180_12675 | Not Available | Negative | 1118852 - 1119220 | 12848.5 |
| 50s ribosomal protein l21 | N180_12680 | Not Available | Negative | 1119280 - 1119591 | 11321.9 |
| hypothetical protein | N180_12685 | Not Available | Negative | 1119707 - 1120243 | 20664.9 |
| c4-dicarboxylate abc transporter | N180_12690 | Not Available | Negative | 1120283 - 1121668 | 49988.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

