Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate dehydrogenase | N180_12595 | Not Available | Positive | 1101643 - 1103175 | 58390.9 |
| 6-phosphogluconolactonase | N180_12600 | Not Available | Positive | 1103156 - 1103881 | 26857.9 |
| hydroxymyristoyl-acp dehydratase | N180_12605 | Not Available | Positive | 1103947 - 1104393 | 16580.2 |
| exopolyphosphatase | N180_12610 | Not Available | Negative | 1104484 - 1105365 | 33081.2 |
| polyphosphate kinase | N180_12615 | Not Available | Negative | 1105371 - 1107428 | 79512.9 |
| hypothetical protein | N180_12620 | Not Available | Negative | 1107664 - 1108359 | 24430.8 |
| nucleotide-binding protein | N180_12625 | Not Available | Positive | 1108435 - 1108926 | 18371.1 |
| gnat family acetyltransferase | N180_12630 | Not Available | Positive | 1108997 - 1109446 | 17305.5 |
| arabinan endo-1,5-alpha-l-arabinosidase | N180_12635 | Not Available | Negative | 1109483 - 1110460 | 36698.7 |
| hypothetical protein | N180_12640 | Not Available | Negative | 1110523 - 1111836 | 49062.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

