Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd transporter | N180_12545 | Not Available | Negative | 1088074 - 1089489 | 51706.4 |
| multidrug transporter acrb | N180_12550 | Not Available | Negative | 1089491 - 1092655 | 114585.0 |
| rnd transporter | N180_12555 | Not Available | Negative | 1092667 - 1093797 | 40513.4 |
| tetr family transcriptional regulator | N180_12560 | Not Available | Negative | 1093999 - 1094592 | 22630.5 |
| hypothetical protein | N180_12565 | Not Available | Negative | 1094820 - 1095419 | 22910.0 |
| aminopeptidase | N180_12570 | Not Available | Positive | 1095420 - 1097786 | 90189.2 |
| hypothetical protein | N180_12575 | Not Available | Positive | 1097865 - 1098590 | 26966.4 |
| hypothetical protein | N180_12580 | Not Available | Positive | 1098627 - 1099250 | 23090.7 |
| plasmid partitioning protein para | N180_12585 | Not Available | Positive | 1099442 - 1100218 | 28492.0 |
| 6-phosphogluconate dehydrogenase | N180_12590 | Not Available | Positive | 1100208 - 1101623 | 52377.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

