Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate adenylyltransferase | N180_12495 | Not Available | Negative | 1074885 - 1075790 | 34361.8 |
| phosphoadenosine phosphosulfate reductase | N180_12500 | Not Available | Negative | 1075805 - 1076509 | 27001.0 |
| siroheme synthase | N180_12505 | Not Available | Negative | 1076511 - 1077971 | 53056.0 |
| uroporphyrin-iii methyltransferase | N180_12510 | Not Available | Negative | 1077981 - 1078775 | 28652.7 |
| nitrite reductase | N180_12515 | Not Available | Negative | 1078772 - 1080865 | 77917.2 |
| hypothetical protein | N180_12520 | Not Available | Positive | 1081075 - 1081329 | 9621.13 |
| hypothetical protein | N180_12525 | Not Available | Positive | 1081785 - 1082585 | 28910.3 |
| hypothetical protein | N180_12530 | Not Available | Negative | 1082588 - 1086250 | 138189.0 |
| nuclease sbccd subunit d | N180_12535 | Not Available | Negative | 1086278 - 1087501 | 46037.8 |
| hypothetical protein | N180_12540 | Not Available | Negative | 1087561 - 1088013 | 17219.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

