Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_09035 | Not Available | Positive | 1052488 - 1053237 | 27951.8 |
| major facilitator transporter | N180_09040 | Not Available | Negative | 1053274 - 1054563 | 46064.8 |
| hypothetical protein | N180_09045 | Not Available | Negative | 1054574 - 1055200 | 23410.6 |
| hypothetical protein | N180_09050 | Not Available | Positive | 1055427 - 1056551 | 41961.3 |
| monovalent cation/h+ antiporter subunit b | N180_09060 | Not Available | Positive | 1059006 - 1059416 | 14761.6 |
| monovalent cation/h+ antiporter subunit c | N180_09065 | Not Available | Positive | 1059419 - 1059772 | 12814.1 |
| monovalent cation/h+ antiporter subunit d | N180_09070 | Not Available | Positive | 1059769 - 1061280 | 55197.6 |
| cation:proton antiporter | N180_09075 | Not Available | Positive | 1061300 - 1061782 | 18758.5 |
| cation:proton antiporter | N180_09080 | Not Available | Positive | 1061779 - 1062054 | 10274.0 |
| ferredoxin | N180_20140 | Not Available | Negative | 1062322 - 1062666 | 12349.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

