Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-ketoglutarate permease | N180_08985 | Not Available | Positive | 1042294 - 1043574 | 46629.4 |
| 2-hydroxyacid dehydrogenase | N180_08990 | Not Available | Positive | 1043595 - 1044572 | 36252.3 |
| sugar kinase | N180_08995 | Not Available | Positive | 1044577 - 1046025 | 53757.3 |
| carbohydrate kinase | N180_09000 | Not Available | Positive | 1046027 - 1047481 | 53006.1 |
| phosphoglycerate mutase | N180_09005 | Not Available | Positive | 1047474 - 1048073 | 22313.4 |
| glycerophosphodiester phosphodiesterase | N180_09010 | Not Available | Positive | 1048079 - 1049023 | 35399.5 |
| hypothetical protein | N180_09015 | Not Available | Positive | 1049358 - 1049981 | 23682.6 |
| hypothetical protein | N180_09020 | Not Available | Positive | 1050003 - 1050650 | 24629.9 |
| peptidylprolyl isomerase | N180_09025 | Not Available | Positive | 1050722 - 1051210 | 17774.4 |
| beta-lactamase | N180_09030 | Not Available | Positive | 1051299 - 1052444 | 42372.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

