Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | N180_12205 | Not Available | Negative | 52155 - 53231 | 38187.2 |
| hypoxanthine phosphoribosyltransferase | N180_12215 | Not Available | Positive | 55507 - 56052 | 20307.6 |
| phosphatidylserine decarboxylase | N180_12220 | Not Available | Positive | 56110 - 56778 | 25266.7 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 56554 - 56665 | Not Available |
| malate dehydrogenase | N180_11485 | Not Available | Negative | 56880 - 57965 | 38758.4 |
| hypothetical protein | N180_11490 | Not Available | Negative | 57973 - 59559 | 60304.1 |
| ribosomal protein s12 methylthiotransferase | N180_11495 | Not Available | Negative | 59606 - 60940 | 50394.5 |
| cell division protein ftsy | N180_11500 | Not Available | Negative | 60970 - 61932 | 34672.9 |
| 50s ribosomal protein l33 | N180_11510 | Not Available | Negative | 62198 - 62380 | 6956.69 |
| 50s ribosomal protein l28 | N180_11515 | Not Available | Negative | 62420 - 62653 | 8852.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

