Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | N180_08870 | Not Available | Positive | 1010936 - 1014235 | 121481.0 |
| hypothetical protein | N180_08875 | Not Available | Positive | 1014598 - 1017639 | 111291.0 |
| hypothetical protein | N180_08880 | Not Available | Positive | 1017658 - 1019196 | 57430.8 |
| alkyl hydroperoxide reductase | N180_08885 | Not Available | Positive | 1019964 - 1021262 | 47841.3 |
| lipid-binding protein | N180_08895 | Not Available | Positive | 1022667 - 1023314 | 23571.3 |
| cytochrome c peroxidase | N180_08900 | Not Available | Positive | 1023414 - 1024367 | 35200.8 |
| tonb-dependent receptor | N180_08905 | Not Available | Positive | 1024452 - 1027220 | 99330.0 |
| hypothetical protein | N180_08910 | Not Available | Positive | 1027275 - 1028138 | 31144.0 |
| hypothetical protein | N180_08915 | Not Available | Negative | 1028212 - 1028751 | 20177.4 |
| hxlr family transcriptional regulator | N180_08930 | Not Available | Negative | 1029251 - 1029592 | 13128.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

