Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | N180_08705 | Not Available | Negative | 980372 - 981115 | 25702.7 |
| hxlr family transcriptional regulator | N180_08710 | Not Available | Positive | 981220 - 981570 | 13349.5 |
| hypothetical protein | N180_08715 | Not Available | Positive | 981759 - 982295 | 20819.4 |
| glycosyl transferase family 2 | N180_08720 | Not Available | Positive | 982385 - 984019 | 61975.5 |
| methionine aminopeptidase | N180_08725 | Not Available | Negative | 984208 - 984969 | 27546.7 |
| hypothetical protein | N180_08730 | Not Available | Positive | 985084 - 985914 | 31929.7 |
| histidine kinase | N180_08735 | Not Available | Positive | 986387 - 987757 | 51273.1 |
| arsr family transcriptional regulator | N180_08740 | Not Available | Positive | 987851 - 988153 | 11561.0 |
| 1,2-oxophytodienoate reductase | N180_08745 | Not Available | Positive | 988171 - 989277 | 40446.8 |
| fad-dependent oxidoreductase | N180_08750 | Not Available | Negative | 989337 - 990464 | 42315.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

