Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketosteroid isomerase | N180_08600 | Not Available | Negative | 961266 - 961613 | 13469.1 |
| hypothetical protein | N180_08605 | Not Available | Negative | 961965 - 962978 | 36503.8 |
| hxlr family transcriptional regulator | N180_08610 | Not Available | Negative | 963478 - 963825 | 13066.0 |
| 3-hydroxyisobutyrate dehydrogenase | N180_08615 | Not Available | Positive | 963947 - 964702 | 26998.3 |
| oxidoreductase | N180_08620 | Not Available | Negative | 964857 - 965930 | 39195.5 |
| hypothetical protein | N180_08625 | Not Available | Negative | 966009 - 966395 | 14452.0 |
| hypothetical protein | N180_08630 | Not Available | Negative | 966401 - 966958 | 20298.2 |
| nad-dependent dehydratase | N180_08635 | Not Available | Negative | 967178 - 967813 | 22950.3 |
| glycosidase | N180_08645 | Not Available | Negative | 968982 - 970031 | 39164.8 |
| hypothetical protein | N180_08650 | Not Available | Positive | 970208 - 972439 | 83696.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

