Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_08465 | Not Available | Positive | 924778 - 925215 | 16885.6 |
| relaxase | N180_08470 | Not Available | Positive | 925218 - 926576 | 51591.4 |
| transcriptional regulator | N180_08475 | Not Available | Positive | 926626 - 927000 | 14496.7 |
| heavy metal transporter | N180_08480 | Not Available | Positive | 926997 - 927590 | 21662.4 |
| hypothetical protein | N180_08485 | Not Available | Positive | 927694 - 927882 | 7309.88 |
| conjugal transfer protein trag | N180_08490 | Not Available | Positive | 928001 - 929995 | 75912.7 |
| arac family transcriptional regulator | N180_08495 | Not Available | Positive | 930102 - 930665 | 21507.2 |
| copper transporter | N180_08500 | Not Available | Positive | 930755 - 933166 | 86720.6 |
| hypothetical protein | N180_08505 | Not Available | Positive | 933266 - 933490 | 8220.74 |
| hypothetical protein | N180_08510 | Not Available | Positive | 933655 - 933993 | 12582.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

