Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal recognition particle | N180_12145 | Not Available | Positive | 38769 - 40109 | 49490.4 |
| hypothetical protein | N180_12155 | Not Available | Negative | 41768 - 42061 | 11223.4 |
| hypothetical protein | N180_12160 | Not Available | Negative | 42206 - 42748 | 20288.7 |
| molecular chaperone hsp90 | N180_12170 | Not Available | Negative | 45185 - 47068 | 70604.9 |
| hypothetical protein | N180_12175 | Not Available | Positive | 47178 - 48146 | 37285.3 |
| hypothetical protein | N180_12180 | Not Available | Positive | 48146 - 49321 | 43078.2 |
| zinc protease | N180_12185 | Not Available | Positive | 49372 - 50601 | 45959.1 |
| peptide deformylase | N180_12190 | Not Available | Positive | 50620 - 51183 | 21684.3 |
| hypothetical protein | N180_12195 | Not Available | Negative | 51180 - 51821 | 23876.8 |
| nitrogen fixation protein nifu | N180_12200 | Not Available | Negative | 51876 - 52121 | 8732.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

