Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase | N180_08200 | Not Available | Negative | 880705 - 881253 | 19926.2 |
| atp f0f1 synthase subunit b | N180_08205 | Not Available | Negative | 881280 - 881774 | 18404.6 |
| atp synthase f0 subunit c | N180_08210 | Not Available | Negative | 881863 - 882063 | 6254.86 |
| atp synthase f0 subunit a | N180_08215 | Not Available | Negative | 882098 - 883228 | 42393.2 |
| hypothetical protein | N180_08220 | Not Available | Negative | 883246 - 883632 | 14470.4 |
| integrase | N180_08225 | Not Available | Positive | 883910 - 885160 | 48470.8 |
| single-stranded dna-binding protein | N180_08230 | Not Available | Positive | 885808 - 886185 | 13842.0 |
| hypothetical protein | N180_08235 | Not Available | Positive | 886229 - 887302 | 39421.7 |
| hypothetical protein | N180_08240 | Not Available | Positive | 887355 - 887837 | 19256.0 |
| 3-isopropylmalate dehydratase | N180_08250 | Not Available | Positive | 888206 - 888388 | 7321.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

