Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| seryl-trna synthetase | N180_08100 | Not Available | Negative | 861206 - 862477 | 47587.8 |
| 16s rrna methyltransferase | N180_08105 | Not Available | Positive | 862509 - 863252 | 27927.5 |
| hypothetical protein | N180_08110 | Not Available | Positive | 863357 - 864013 | 25097.2 |
| acyltransferase | N180_08115 | Not Available | Positive | 864026 - 865645 | 60568.4 |
| nad+ synthetase | N180_08120 | Not Available | Negative | 865724 - 867364 | 60787.1 |
| hypothetical protein | N180_08125 | Not Available | Negative | 867375 - 868034 | 24442.2 |
| patatin | N180_08130 | Not Available | Positive | 868357 - 869160 | 29453.3 |
| 2-phosphosulfolactate phosphatase | N180_08135 | Not Available | Negative | 869157 - 869876 | 25854.0 |
| glycine cleavage system protein t | N180_08140 | Not Available | Negative | 869910 - 870989 | 39505.0 |
| glycosyl transferase family 4 | N180_08145 | Not Available | Negative | 871032 - 872234 | 46979.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

