Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_03465 | Not Available | Negative | 837498 - 838013 | 19527.2 |
| hypothetical protein | N180_03470 | Not Available | Negative | 838010 - 838786 | 29748.8 |
| cystathionine gamma-synthase | N180_03475 | Not Available | Negative | 838793 - 839932 | 42002.4 |
| proline--trna ligase | N180_03480 | Not Available | Negative | 839964 - 841436 | 55511.9 |
| hypothetical protein | N180_03485 | Not Available | Positive | 841543 - 842523 | 34684.6 |
| hypothetical protein | N180_03490 | Not Available | Positive | 842539 - 844095 | 57075.3 |
| aldose epimerase | N180_08030 | Not Available | Negative | 844851 - 846029 | 42437.8 |
| dna mismatch repair protein mutt | N180_08035 | Not Available | Positive | 846177 - 846884 | 27320.3 |
| ribulokinase | N180_08040 | Not Available | Positive | 847119 - 848795 | 60595.2 |
| ribulose 5-phosphate epimerase | N180_08045 | Not Available | Positive | 848801 - 849499 | 25707.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

