Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_03415 | Not Available | Positive | 825537 - 826430 | 33468.8 |
| hypothetical protein | N180_03420 | Not Available | Positive | 826430 - 829075 | 100897.0 |
| copy family transcriptional repressor | N180_03425 | Not Available | Positive | 829121 - 829516 | 14963.0 |
| hypothetical protein | N180_03430 | Not Available | Positive | 829520 - 830587 | 40856.7 |
| hypothetical protein | N180_03435 | Not Available | Positive | 830923 - 831780 | 31295.3 |
| hypothetical protein | N180_03440 | Not Available | Positive | 831783 - 831977 | 7405.91 |
| acetyl-coa acetyltransferase | N180_03445 | Not Available | Positive | 832018 - 833193 | 40591.6 |
| amino acid transporter | N180_03450 | Not Available | Positive | 833340 - 835001 | 61437.2 |
| peptide abc transporter | N180_03455 | Not Available | Positive | 835061 - 836596 | 56319.8 |
| dolichyl-phosphate beta-d-mannosyltransferase | N180_03460 | Not Available | Positive | 836785 - 837513 | 27880.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

