Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility protein | N180_12090 | Not Available | Negative | 28091 - 28564 | 18237.8 |
| dna polymerase iii subunit gamma/tau | N180_12100 | Not Available | Negative | 29980 - 31128 | 43594.6 |
| holliday junction resolvase | N180_12105 | Not Available | Positive | 31168 - 31584 | 15777.2 |
| methyltransferase | N180_12110 | Not Available | Positive | 31593 - 32228 | 24042.9 |
| hemagglutinin | N180_12115 | Not Available | Positive | 32231 - 32941 | 26682.9 |
| hemagglutinin | N180_12120 | Not Available | Positive | 32976 - 33812 | 31957.0 |
| hypothetical protein | N180_12125 | Not Available | Positive | 33860 - 34615 | 28583.6 |
| membrane protein | N180_12130 | Not Available | Positive | 34612 - 34953 | 13813.9 |
| hypothetical protein | N180_12135 | Not Available | Positive | 34979 - 36034 | 39588.1 |
| hypothetical protein | N180_12140 | Not Available | Negative | 36035 - 38470 | 92908.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

