Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_03250 | Not Available | Positive | 790890 - 791399 | 19198.3 |
| histidine ammonia-lyase | N180_03255 | Not Available | Positive | 791383 - 792945 | 56419.0 |
| urocanate hydratase | N180_03260 | Not Available | Positive | 792923 - 794596 | 60878.6 |
| imidazolonepropionase | N180_03265 | Not Available | Positive | 794596 - 795840 | 44692.7 |
| hypothetical protein | N180_03270 | Not Available | Positive | 795842 - 796834 | 35700.4 |
| Trna-pro | Not Available | Not Available | Positive | 797161 - 797234 | Not Available |
| hypothetical protein | N180_03285 | Not Available | Negative | 797482 - 799647 | 79189.5 |
| arac family transcriptional regulator | N180_03290 | Not Available | Negative | 800051 - 800851 | 28537.2 |
| hypothetical protein | N180_03295 | Not Available | Positive | 800954 - 801535 | 21945.6 |
| amino acid lyase | N180_03300 | Not Available | Negative | 801585 - 802625 | 38233.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

