Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c | N180_03200 | Not Available | Positive | 777580 - 777891 | 11346.8 |
| hypothetical protein | N180_03205 | Not Available | Positive | 778013 - 779038 | 37716.6 |
| hypothetical protein | N180_03210 | Not Available | Positive | 779161 - 780216 | 40206.2 |
| hypothetical protein | N180_03215 | Not Available | Positive | 780222 - 780911 | 26688.3 |
| hypothetical protein | N180_03220 | Not Available | Positive | 780988 - 782667 | 63771.5 |
| metallophosphoesterase | N180_03225 | Not Available | Negative | 782677 - 783330 | 24936.7 |
| abc transporter permease | N180_03230 | Not Available | Negative | 783485 - 785875 | 89483.6 |
| arac family transcriptional regulator | N180_03235 | Not Available | Negative | 786013 - 786888 | 33487.4 |
| 1-pyrroline-5-carboxylate dehydrogenase | N180_03240 | Not Available | Positive | 787182 - 788822 | 59526.0 |
| transmembrane ion channel | N180_03245 | Not Available | Positive | 788957 - 790795 | 70201.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

