Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxynucleoside kinase | N180_02515 | Not Available | Positive | 657272 - 657886 | 23892.4 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | N180_02520 | Not Available | Positive | 657935 - 658675 | 28118.4 |
| hypothetical protein | N180_02525 | Not Available | Positive | 658723 - 659262 | 20799.8 |
| ctp synthetase | N180_02530 | Not Available | Positive | 659725 - 661341 | 59923.0 |
| preprotein translocase subunit yidc | N180_02535 | Not Available | Positive | 661362 - 663164 | 68395.2 |
| peptidase s9 | N180_02540 | Not Available | Positive | 663328 - 666168 | 106004.0 |
| membrane protein | N180_02545 | Not Available | Positive | 666257 - 667495 | 44715.1 |
| osmotically inducible protein osmc | N180_02550 | Not Available | Positive | 667564 - 667977 | 15318.6 |
| heat-shock protein | N180_02555 | Not Available | Negative | 668085 - 669353 | 47595.4 |
| dehydrogenase | N180_02560 | Not Available | Negative | 669417 - 670574 | 42115.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

