Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | N180_21050 | Not Available | Negative | 648180 - 648998 | 31395.7 |
| transposase | N180_21055 | Not Available | Negative | 649147 - 649509 | 14013.8 |
| abc transporter | N180_02465 | Not Available | Negative | 649626 - 650870 | 45817.0 |
| s-adenosylmethionine trna ribosyltransferase | N180_02470 | Not Available | Positive | 651113 - 652162 | 40070.3 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | N180_02475 | Not Available | Positive | 652275 - 652958 | 25532.1 |
| hypothetical protein | N180_02485 | Not Available | Negative | 653290 - 653511 | 8587.66 |
| cob(i)yrinic acid a c-diamide adenosyltransferase | N180_02490 | Not Available | Negative | 653596 - 654144 | 20605.0 |
| macrolide abc transporter atp-binding protein | N180_02495 | Not Available | Negative | 654158 - 654925 | 28002.6 |
| glutamyl-trna amidotransferase | N180_02500 | Not Available | Negative | 654988 - 655278 | 11140.3 |
| tryptophanyl-trna synthetase | N180_02510 | Not Available | Positive | 656228 - 657226 | 37434.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

