Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| x-pro dipeptidyl-peptidase | N180_07975 | Not Available | Positive | 638107 - 639993 | 71236.8 |
| aldose epimerase | N180_07980 | Not Available | Negative | 640038 - 640904 | 33036.2 |
| transcriptional regulator | N180_07985 | Not Available | Negative | 640915 - 641289 | 14019.9 |
| hypothetical protein | N180_07990 | Not Available | Negative | 642091 - 642567 | 16148.6 |
| hypothetical protein | N180_07995 | Not Available | Negative | 642642 - 642875 | 8474.37 |
| cold-shock protein | N180_08000 | Not Available | Positive | 643093 - 643299 | 7424.62 |
| hypothetical protein | N180_08005 | Not Available | Positive | 643371 - 644201 | 30564.7 |
| metallo-beta-lactamase | N180_08010 | Not Available | Positive | 644305 - 645690 | 51448.8 |
| hypothetical protein | N180_08015 | Not Available | Negative | 645734 - 646327 | 22025.4 |
| flagellar motor protein motb | N180_08020 | Not Available | Positive | 646713 - 648041 | 47655.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

