Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | N180_07765 | Not Available | Negative | 586513 - 587634 | 42438.8 |
| hypothetical protein | N180_07770 | Not Available | Negative | 588023 - 589219 | 45190.0 |
| hypothetical protein | N180_07775 | Not Available | Negative | 589368 - 590345 | 36083.9 |
| hypothetical protein | N180_07780 | Not Available | Negative | 590352 - 591704 | 50227.1 |
| hypothetical protein | N180_07785 | Not Available | Positive | 591818 - 593071 | 47300.6 |
| transcriptional regulator | N180_07790 | Not Available | Positive | 593071 - 593751 | 26273.0 |
| dihydropteridine reductase | N180_07795 | Not Available | Positive | 593950 - 595155 | 45308.2 |
| rrf2 family transcriptional regulator | N180_07800 | Not Available | Negative | 595206 - 595643 | 16056.4 |
| methyltransferase type 11 | N180_07805 | Not Available | Negative | 596017 - 596724 | 26467.6 |
| hypothetical protein | N180_07810 | Not Available | Negative | 596785 - 600753 | 151839.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

