Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferrichrome-iron receptor | N180_07710 | Not Available | Negative | 570249 - 572882 | 97413.9 |
| hypothetical protein | N180_07715 | Not Available | Negative | 572946 - 573908 | 36787.5 |
| hypothetical protein | N180_07720 | Not Available | Negative | 573968 - 574522 | 21836.3 |
| tonb-dependent receptor | N180_07725 | Not Available | Positive | 575086 - 577665 | 93439.2 |
| chloramphenicol acetyltransferase | N180_07730 | Not Available | Positive | 578230 - 578865 | 24036.7 |
| peptidase m28 | N180_07735 | Not Available | Negative | 578929 - 580473 | 56045.5 |
| membrane protein | N180_07740 | Not Available | Negative | 580719 - 581582 | 31927.7 |
| fumarate reductase | N180_07745 | Not Available | Negative | 581662 - 582405 | 27148.6 |
| succinate dehydrogenase | N180_07750 | Not Available | Negative | 582412 - 584328 | 70895.1 |
| 2-oxoglutarate translocator | N180_07760 | Not Available | Negative | 585019 - 586494 | 53220.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

