Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | N180_11980 | Not Available | Positive | 152 - 1798 | 63779.3 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 239 - 3118 | Not Available |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 1506 - 1887 | Not Available |
| transcriptional regulator | N180_11985 | Not Available | Positive | 1810 - 2475 | 24841.9 |
| restriction endonuclease or methylase | N180_11995 | Not Available | Positive | 3845 - 4909 | 41324.3 |
| hypothetical protein | N180_12000 | Not Available | Positive | 5252 - 7330 | 79155.6 |
| hypothetical protein | N180_12005 | Not Available | Positive | 7330 - 8271 | 36021.9 |
| Trna-arg | Not Available | Not Available | Positive | 8683 - 8757 | Not Available |
| hypothetical protein | N180_12020 | Not Available | Positive | 9760 - 10113 | 12974.4 |
| hypothetical protein | N180_12025 | Not Available | Positive | 10101 - 10382 | 11005.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

