Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-anti-sigma factor | N180_07485 | Not Available | Negative | 528098 - 528487 | 14410.2 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | N180_07490 | Not Available | Negative | 528519 - 529472 | 36169.1 |
| phosphate starvation protein phoh | N180_07495 | Not Available | Negative | 529509 - 530474 | 35642.5 |
| hypothetical protein | N180_07500 | Not Available | Positive | 530577 - 531356 | 29139.4 |
| hypothetical protein | N180_07515 | Not Available | Negative | 532084 - 533295 | 45749.2 |
| 3-phosphoglycerate dehydrogenase | N180_07520 | Not Available | Negative | 533351 - 534301 | 34040.1 |
| mfs transporter | N180_07525 | Not Available | Negative | 534310 - 535377 | 39422.5 |
| ribulose-phosphate 3-epimerase | N180_07530 | Not Available | Negative | 535465 - 536139 | 24483.0 |
| polynucleotide phosphorylase | N180_07535 | Not Available | Negative | 536277 - 538424 | 78029.1 |
| 30s ribosomal protein s15 | N180_07540 | Not Available | Negative | 538541 - 538843 | 11492.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

