Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase | N180_17235 | Not Available | Positive | 520199 - 521074 | 33018.3 |
| 3-oxoacyl-acp synthase | N180_17240 | Not Available | Negative | 521139 - 521591 | 16721.8 |
| nitroreductase | N180_17245 | Not Available | Negative | 521597 - 522175 | 22105.6 |
| abc transporter atp-binding protein | N180_17250 | Not Available | Positive | 522376 - 523998 | 61328.7 |
| hypothetical protein | N180_17255 | Not Available | Positive | 524095 - 524283 | 6944.12 |
| abc transporter atp-binding protein | N180_17260 | Not Available | Positive | 524421 - 525047 | 23234.8 |
| abc transporter permease | N180_17265 | Not Available | Positive | 525047 - 526264 | 44470.1 |
| hypothetical protein | N180_17270 | Not Available | Positive | 526279 - 526716 | 16428.4 |
| fur family transcriptional regulator | N180_17275 | Not Available | Positive | 526718 - 527167 | 16833.4 |
| ribonuclease z | N180_07480 | Not Available | Negative | 527186 - 528097 | 33968.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

