Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | N180_17180 | Not Available | Negative | 504941 - 505567 | 23580.8 |
| orotate phosphoribosyltransferase | N180_17185 | Not Available | Positive | 505745 - 506404 | 24225.9 |
| orotate phosphoribosyltransferase | N180_17190 | Not Available | Positive | 506410 - 506808 | 14691.7 |
| endonuclease | N180_17195 | Not Available | Negative | 506925 - 507731 | 30913.3 |
| permease | N180_17200 | Not Available | Negative | 507767 - 508675 | 32590.9 |
| glycosyl transferase | N180_17210 | Not Available | Positive | 511682 - 513970 | 86742.6 |
| glycosyl transferase | N180_17215 | Not Available | Positive | 513967 - 514977 | 37309.3 |
| glycosidase | N180_17220 | Not Available | Negative | 515001 - 516467 | 55854.2 |
| hypothetical protein | N180_17225 | Not Available | Positive | 516852 - 517460 | 21611.6 |
| peptidase s9 | N180_17230 | Not Available | Negative | 517543 - 520047 | 95707.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

