Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | N180_10945 | Not Available | Negative | 495020 - 496291 | 47613.8 |
| membrane protein | N180_10950 | Not Available | Positive | 496601 - 497134 | 19118.8 |
| Tmrna,resume consensus sequence (at 88): tataattggcgaaaataa | Not Available | Not Available | Positive | 497178 - 497543 | Not Available |
| hypothetical protein | N180_17145 | Not Available | Negative | 497672 - 498004 | 12253.5 |
| hypothetical protein | N180_17150 | Not Available | Negative | 498110 - 500896 | 105620.0 |
| hypothetical protein | N180_17155 | Not Available | Positive | 501036 - 501347 | 11700.5 |
| atp-dependent endonuclease | N180_17160 | Not Available | Negative | 501584 - 503035 | 55213.8 |
| hypothetical protein | N180_17165 | Not Available | Positive | 503088 - 503921 | 31057.9 |
| methyltransferase | N180_17170 | Not Available | Positive | 503912 - 504451 | 20290.4 |
| phosphopantetheine adenylyltransferase | N180_17175 | Not Available | Positive | 504461 - 504931 | 17569.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

