Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l13 | N180_10825 | Not Available | Negative | 468515 - 468958 | 16276.8 |
| hypothetical protein | N180_10830 | Not Available | Negative | 469049 - 469420 | 13776.7 |
| hypothetical protein | N180_10835 | Not Available | Positive | 469535 - 469741 | 7062.5 |
| metallo-beta-lactamase | N180_10840 | Not Available | Positive | 469890 - 471287 | 51754.9 |
| mechanosensitive ion channel protein mscs | N180_10845 | Not Available | Positive | 471300 - 472406 | 42268.3 |
| methyltransferase | N180_10850 | Not Available | Positive | 472419 - 473111 | 26456.2 |
| peptidase t | N180_10855 | Not Available | Negative | 473188 - 474441 | 45601.2 |
| muconate cycloisomerase | N180_10870 | Not Available | Positive | 476268 - 477302 | 37828.0 |
| nadh oxidase | N180_10880 | Not Available | Negative | 477516 - 477833 | 11866.2 |
| hypothetical protein | N180_10885 | Not Available | Positive | 478004 - 479098 | 41517.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

