Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase | N180_10765 | Not Available | Negative | 454014 - 454991 | 36787.3 |
| susd/ragb family protein | N180_10775 | Not Available | Negative | 456612 - 458165 | 58122.8 |
| tonb-dependent receptor | N180_10780 | Not Available | Negative | 458260 - 461400 | 114976.0 |
| abc transporter atp-binding protein | N180_10785 | Not Available | Negative | 461837 - 463576 | 64949.3 |
| ribosome-recycling factor | N180_10790 | Not Available | Negative | 463739 - 464302 | 20979.4 |
| uridylate kinase | N180_10795 | Not Available | Negative | 464339 - 465046 | 25876.7 |
| n-acetylglucosamine-6-phosphate deacetylase | N180_10800 | Not Available | Negative | 465074 - 466189 | 40103.5 |
| elongation factor ts | N180_10810 | Not Available | Negative | 466325 - 467161 | 30329.3 |
| 30s ribosomal protein s2 | N180_10815 | Not Available | Negative | 467267 - 468091 | 30461.8 |
| 30s ribosomal protein s9 | N180_10820 | Not Available | Negative | 468112 - 468498 | 14371.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

