Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein rada | N180_10715 | Not Available | Positive | 440188 - 441564 | 49912.1 |
| hypothetical protein | N180_10720 | Not Available | Positive | 441626 - 442099 | 16974.0 |
| carbamoyl phosphate synthase large subunit | N180_10725 | Not Available | Negative | 442176 - 444992 | 104252.0 |
| hypothetical protein | N180_10730 | Not Available | Negative | 445416 - 445655 | 9077.9 |
| nadr | N180_10735 | Not Available | Positive | 445641 - 446174 | 20407.4 |
| tonb-dependent receptor | N180_10740 | Not Available | Positive | 446398 - 448845 | 91145.9 |
| thiamine-phosphate pyrophosphorylase | N180_10745 | Not Available | Positive | 448977 - 449609 | 22650.1 |
| mfs transporter | N180_10750 | Not Available | Positive | 449669 - 450952 | 46950.5 |
| abc transporter substrate-binding protein | N180_10755 | Not Available | Negative | 450982 - 451980 | 36688.4 |
| alpha-l-arabinofuranosidase | N180_10760 | Not Available | Negative | 452021 - 454012 | 74169.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

