Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_17465 | Not Available | Positive | 419256 - 419564 | 11968.8 |
| 23s rrna methyltransferase | N180_17470 | Not Available | Negative | 419561 - 420514 | 35650.7 |
| short-chain dehydrogenase | N180_17475 | Not Available | Negative | 420552 - 421304 | 26241.4 |
| fucose permease | N180_17480 | Not Available | Negative | 421431 - 422840 | 50843.8 |
| hypothetical protein | N180_17485 | Not Available | Positive | 423002 - 423370 | 13290.7 |
| dna repair protein | N180_17490 | Not Available | Positive | 423360 - 424085 | 28099.4 |
| Trna-val | Not Available | Not Available | Positive | 424194 - 424271 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 424344 - 424421 | Not Available |
| peptidase | N180_17505 | Not Available | Negative | 424465 - 426309 | 69870.2 |
| hypothetical protein | N180_17510 | Not Available | Positive | 426344 - 426682 | 12747.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

