Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_00445 | Not Available | Positive | 4284413 - 4285015 | 21625.4 |
| 2og-fe(ii) oxygenase | N180_00450 | Not Available | Negative | 4285447 - 4286055 | 23456.9 |
| dna ligase | N180_00455 | Not Available | Negative | 4286111 - 4288792 | 101096.0 |
| peptidase | N180_00460 | Not Available | Negative | 4288909 - 4291335 | 89060.0 |
| redoxin | N180_00465 | Not Available | Negative | 4291443 - 4292009 | 21175.7 |
| folate hydrolase | N180_00470 | Not Available | Negative | 4292020 - 4294182 | 79324.9 |
| alcohol dehydrogenase | N180_00475 | Not Available | Positive | 4294482 - 4295477 | 35605.9 |
| short-chain dehydrogenase | N180_00480 | Not Available | Negative | 4295537 - 4296304 | 27222.7 |
| dihydroxy-acid dehydratase | N180_00485 | Not Available | Negative | 4296312 - 4298027 | 61692.5 |
| hypothetical protein | N180_00490 | Not Available | Positive | 4298131 - 4299000 | 33338.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

