Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar isomerase | N180_00185 | Not Available | Negative | 4204793 - 4206067 | 47248.8 |
| short-chain dehydrogenase | N180_00190 | Not Available | Negative | 4206104 - 4208224 | 77289.2 |
| sugar:proton symporter | N180_00195 | Not Available | Negative | 4208248 - 4209324 | 39104.2 |
| transcriptional regulator | N180_00200 | Not Available | Negative | 4209419 - 4210450 | 39135.7 |
| alpha-l-rhamnosidase | N180_00205 | Not Available | Negative | 4210504 - 4212267 | 65827.4 |
| glycoside hydrolase family 2 | N180_00210 | Not Available | Negative | 4212292 - 4215576 | 121983.0 |
| alpha-l-rhamnosidase | N180_00215 | Not Available | Negative | 4215639 - 4218407 | 102798.0 |
| hypothetical protein | N180_00220 | Not Available | Negative | 4218424 - 4219938 | 56246.6 |
| hypothetical protein | N180_00225 | Not Available | Negative | 4219949 - 4223146 | 115910.0 |
| alpha-rhamnosidase | N180_00230 | Not Available | Negative | 4223226 - 4225898 | 100434.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

