Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinose isomerase | N180_00125 | Not Available | Negative | 4187938 - 4189371 | 52381.7 |
| glycosyl hydrolase | N180_00130 | Not Available | Negative | 4189377 - 4192403 | 112574.0 |
| tonb-dependent receptor | N180_00140 | Not Available | Negative | 4193968 - 4197060 | 113165.0 |
| arac family transcriptional regulator | N180_00150 | Not Available | Positive | 4197373 - 4198263 | 33986.6 |
| succinate-semialdehyde dehydrogenase | N180_00155 | Not Available | Negative | 4198304 - 4199677 | 49474.6 |
| hypothetical protein | N180_00160 | Not Available | Positive | 4199981 - 4200628 | 24309.3 |
| hypothetical protein | N180_00165 | Not Available | Negative | 4200617 - 4201285 | 24347.3 |
| 4fe-4s ferredoxin | N180_00170 | Not Available | Negative | 4201261 - 4202634 | 51228.5 |
| fe-s oxidoreductase | N180_00175 | Not Available | Negative | 4202640 - 4203395 | 27790.8 |
| carbohydrate kinase | N180_00180 | Not Available | Negative | 4203399 - 4204793 | 53232.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

