Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | N180_02425 | Not Available | Negative | 4147864 - 4149273 | 51300.0 |
| hypothetical protein | N180_02430 | Not Available | Positive | 4149362 - 4149736 | 14089.1 |
| hypothetical protein | N180_02435 | Not Available | Positive | 4149801 - 4150349 | 20495.3 |
| hypothetical protein | N180_02440 | Not Available | Negative | 4150380 - 4152758 | 88069.9 |
| Trna-lys | Not Available | Not Available | Positive | 4153610 - 4153685 | Not Available |
| sugar hydrolase | N180_02455 | Not Available | Negative | 4153874 - 4156156 | 86086.5 |
| thiouridylase | N180_02460 | Not Available | Positive | 4156406 - 4157497 | 40583.3 |
| hydroxyacid dehydrogenase | N180_00005 | Not Available | Negative | 4157602 - 4158648 | 38096.4 |
| pseudouridylate synthase | N180_00010 | Not Available | Negative | 4158703 - 4159383 | 25839.8 |
| hypothetical protein | N180_00015 | Not Available | Negative | 4159412 - 4160254 | 31933.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

