Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | N180_02320 | Not Available | Positive | 4122611 - 4123267 | 24591.7 |
| fosmidomycin resistance protein | N180_02325 | Not Available | Positive | 4123304 - 4124533 | 44367.6 |
| peptidase c69 | N180_02330 | Not Available | Negative | 4124667 - 4126004 | 48477.5 |
| tldd protein | N180_02335 | Not Available | Negative | 4126008 - 4127648 | 60055.1 |
| rna polymerase sigma factor | N180_02340 | Not Available | Positive | 4127853 - 4128398 | 21268.8 |
| hypothetical protein | N180_02345 | Not Available | Positive | 4128464 - 4129117 | 24631.6 |
| hypothetical protein | N180_02350 | Not Available | Positive | 4129142 - 4130371 | 46659.3 |
| hypothetical protein | N180_02355 | Not Available | Positive | 4130522 - 4130716 | 7300.71 |
| hypothetical protein | N180_02360 | Not Available | Positive | 4130755 - 4131807 | 41262.1 |
| hypothetical protein | N180_02365 | Not Available | Positive | 4131804 - 4132526 | 27244.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

